NovoSNP

Category
Gene/marker conversion
Usability
Easy to use
Platform
Windows
Linux

NovoSNP is a program that identifies sequence variants (SNP and InDel) in sequencing projects. It automatically reads trace files from Sanger sequencing, orientates the sequence in the same direction, aligns them against a reference sequence and lists the sequence variations. The output is a list of SNP or InDel types and positions. It can also clip and annotate sequences. This tool is particularly useful for small sequencing projects using primers designed with the program ConservedPrimers.

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